ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5abqA1 - ECOD Domain | ECOD

ECOD/Domains/e5abqA1

e5abqA1

UID: 001700013

PDB

Range: A:3-314
PDB: 5ABQ chain A(all domains)
UniProt: O94753 (all domains)
Gene: vpl2

Molecule: VERSATILE PEROXIDASE

3D Structure

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Related Domains

Browse other domains in peroxidase,Peroxidase_ext →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupHeme-dependent peroxidases(136)

HH-groupHeme-dependent peroxidases(136.1)

TT-groupHeme-dependent peroxidases(136.1.1)

FFamilyperoxidase,Peroxidase_ext(136.1.1.2)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267
Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00141peroxidase

Peroxidase

ClanCL0617Peroxidase

PF11895Peroxidase_ext

Fungal peroxidase extension region

ClanCL0617Peroxidase

External Links

ECOD PDB View: 5ABQ RCSB PDB: 5ABQ PDBe: 5ABQ UniProt: O94753

Downloads

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