ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5cb4A1 - ECOD Domain | ECOD

ECOD/Domains/e5cb4A1

e5cb4A1

UID: 001700068

PDB

Range: A:1-244
PDB: 5CB4 chain A(all domains)
UniProt: A0A0R4I993 (all domains)

Molecule: Tubulin alpha

3D Structure

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Related Domains

Browse other domains in Tubulin →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupTubulin nucleotide-binding domain-like(2003.1.6)

FFamilyTubulin(2003.1.6.1)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-TriphosphateGTP
drugDrugBank DB04137
TivantinibTIV
drugDrugBank DB12200

Pfam Families

PF00091Tubulin

Tubulin/FtsZ family, GTPase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5CB4 RCSB PDB: 5CB4 PDBe: 5CB4 UniProt: A0A0R4I993

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Calcium ionCA

metal

Magnesium ionMG

metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.