ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5cd1D1 - ECOD Domain | ECOD

ECOD/Domains/e5cd1D1

e5cd1D1

UID: 001700120

PDB

Range: D:72-289
PDB: 5CD1 chain D(all domains)
UniProt: Q96FX7 (all domains)
Gene: TRMT61A

Molecule: tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A

3D Structure

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Related Domains

Browse other domains in GCD14 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyGCD14(2003.1.5.69)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

tRNA methyltransferase complex GCD14 subunit

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5CD1 RCSB PDB: 5CD1 PDBe: 5CD1 UniProt: Q96FX7

Downloads

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