ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5cq1A1 - ECOD Domain | ECOD

ECOD/Domains/e5cq1A1

e5cq1A1

UID: 001700149

PDB

Range: A:60-576
PDB: 5CQ1 chain A(all domains)
UniProt: Q9LV91 (all domains)
Gene: DPE1

Molecule: 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_77 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_77(2002.1.1.93)

Ligands

in contact, ≤ 4 Å

alpha-D-glucopyranoseGLC
within 5 Å only

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02446Glyco_hydro_77

4-alpha-glucanotransferase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5CQ1 RCSB PDB: 5CQ1 PDBe: 5CQ1 UniProt: Q9LV91

Downloads

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