ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5d9yA1 - ECOD Domain | ECOD

ECOD/Domains/e5d9yA1

e5d9yA1

UID: 001700201

PDB

Range: A:1132-1463,A:1844-1921
PDB: 5D9Y chain A(all domains)
UniProt: Q6N021 (all domains)
Gene: TET2

Molecule: Methylcytosine dioxygenase TET2,Methylcytosine dioxygenase TET2

3D Structure

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Related Domains

Browse other domains in Tet_JBP →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyTet_JBP(10.12.1.47)

Ligands

in contact, ≤ 4 Å

FE (III) IONFE
metal
N-oxalylglycineOGA
Zinc ionZN

Pfam Families

PF12851Tet_JBP

Oxygenase domain of the 2OGFeDO superfamily

ClanCL0029Cupin

External Links

ECOD PDB View: 5D9Y RCSB PDB: 5D9Y PDBe: 5D9Y UniProt: Q6N021

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.