ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5dleC1 - ECOD Domain | ECOD

ECOD/Domains/e5dleC1

e5dleC1

UID: 001700219

PDB

Range: C:162-265
PDB: 5DLE chain C(all domains)
UniProt: O51369 (all domains)
Gene: BB_0408

Molecule: Pts system, fructose-specific iiabc component

3D Structure

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Related Domains

Browse other domains in PTS_IIB →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupFlavoproteins/Phosphotyrosine protein phosphatases-like(2007.2)

TT-groupPhosphotyrosine protein phosphatases I-like(2007.2.2)

FFamilyPTS_IIB(2007.2.2.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Imidazole)

ImidazoleIMD
DrugBank DB03366

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02302PTS_IIB

PTS system, Lactose/Cellobiose specific IIB subunit

ClanCL0031Phosphatase

External Links

ECOD PDB View: 5DLE RCSB PDB: 5DLE PDBe: 5DLE UniProt: O51369

Downloads

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