ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5bqnA1 - ECOD Domain | ECOD

ECOD/Domains/e5bqnA1

e5bqnA1

UID: 001701000

PDB

Range: A:460-871
PDB: 5BQN chain A(all domains)
UniProt: P19321 (all domains)
Gene: botD

Molecule: Botulinum neurotoxin type D,Botulinum neurotoxin type D

3D Structure

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Related Domains

Browse other domains in Toxin_trans →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupBotulinum neurotoxin A heavy chain(4950)

HH-groupBotulinum neurotoxin A heavy chain(4950.1)

TT-groupBotulinum neurotoxin A heavy chain(4950.1.1)

FFamilyToxin_trans(4950.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (HEPES)

HEPESEPE
DrugBank DB16872

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07952Toxin_trans

Clostridium neurotoxin, Translocation domain

ClanCL0935Toxin_transloc

External Links

ECOD PDB View: 5BQN RCSB PDB: 5BQN PDBe: 5BQN UniProt: P19321

Downloads

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