ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2axrA2 - ECOD Domain | ECOD

ECOD/Domains/e2axrA2

e2axrA2

UID: 001710311

PDB

Range: A:207-474
PDB: 2AXR chain A(all domains)
UniProt: Q6PW77 (all domains)
Gene: gluO

Molecule: glucooligosaccharide oxidase

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFAD-linked oxidases, C-terminal domain(304.6)

TT-groupFAD-linked oxidases, C-terminal domain(304.6.1)

FFamilyBBE(304.6.1.3)

Ligands

in contact, ≤ 4 Å

(2R,3R,4R,5R)-4,5-Dihydroxy-2-(hydroxymethyl)-6-oxo-3-piperidinyl beta-D-glucopyranosideABL
drugDrugBank DB04096
Flavin adenine dinucleotideFAD
drug

Pfam Families

Berberine and berberine like

ClanCL0277FAD-oxidase_C

External Links

ECOD PDB View: 2AXR RCSB PDB: 2AXR PDBe: 2AXR UniProt: Q6PW77

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03147

N-AcetylglucosamineNAG

drugDrugBank DB00141

Zinc ionZN

metal

Shown in the structure viewer. Drug annotations from DrugDomain.