ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2du6A1 - ECOD Domain | ECOD

ECOD/Domains/e2du6A1

e2du6A1

UID: 001710465

PDB

Range: A:1-355
PDB: 2DU6 chain A(all domains)
UniProt: O30126 (all domains)
Gene: sepS

Molecule: O-phosphoseryl-tRNA synthetase

3D Structure

Loading viewer...

Related Domains

Browse other domains in tRNA-synt_2d →

Classification

AArchitecturea+b three layers(a.12)

XX-groupClass II aaRS and biotin synthetases(314)

HH-groupClass II aaRS and biotin synthetases(314.1)

TT-groupClass II aaRS and biotin synthetases(314.1.1)

FFamilytRNA-synt_2d(314.1.1.3)

Pfam Families

PF01409tRNA-synt_2d

tRNA synthetases class II core domain (F)

ClanCL0040tRNA_synt_II

External Links

ECOD PDB View: 2DU6 RCSB PDB: 2DU6 PDBe: 2DU6 UniProt: O30126

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure