ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1l9zD8 - ECOD Domain | ECOD

ECOD/Domains/e1l9zD8

e1l9zD8

UID: 001710953

PDB

Range: D:3-157,D:453-616
PDB: 1L9Z chain D(all domains)
UniProt: Q9KWU6 (all domains)
Gene: rpoC

Molecule: RNA POLYMERASE, BETA-PRIME SUBUNIT

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb1_1 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupN-terminal domain in RNA-polymerase beta-prime subunit(4246)

HH-groupN-terminal domain in RNA-polymerase beta-prime subunit(4246.1)

TT-groupN-terminal domain in RNA-polymerase beta-prime subunit(4246.1.1)

FFamilyRNA_pol_Rpb1_1(4246.1.1.2)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF04997RNA_pol_Rpb1_1

RNA polymerase Rpb1, domain 1

External Links

ECOD PDB View: 1L9Z RCSB PDB: 1L9Z PDBe: 1L9Z UniProt: Q9KWU6

Downloads

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