ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3rj8A1 - ECOD Domain | ECOD

ECOD/Domains/e3rj8A1

e3rj8A1

UID: 001711357

PDB

Range: A:208-473
PDB: 3RJ8 chain A(all domains)
UniProt: I1SB12 (all domains)
Gene: MnCO

Molecule: Carbohydrate oxidase

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFAD-linked oxidases, C-terminal domain(304.6)

TT-groupFAD-linked oxidases, C-terminal domain(304.6.1)

FFamilyBBE(304.6.1.3)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Berberine and berberine like

ClanCL0277FAD-oxidase_C

External Links

ECOD PDB View: 3RJ8 RCSB PDB: 3RJ8 PDBe: 3RJ8 UniProt: I1SB12

Downloads

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