ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2w9mB4 - ECOD Domain | ECOD

ECOD/Domains/e2w9mB4

e2w9mB4

UID: 001711580

PDB

Range: B:157-329
PDB: 2W9M chain B(all domains)
UniProt: Q9RX48 (all domains)
Gene: DR_0467

Molecule: POLYMERASE X

3D Structure

Loading viewer...

Related Domains

Browse other domains in DNA_pol_B_thumb →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNucleotidyltransferase-like(316)

HH-groupNucleotidyltransferase(316.1)

TT-groupNucleotidyltransferase(316.1.1)

FFamilyDNA_pol_B_thumb(316.1.1.23)

Ligands

in contact, ≤ 4 Å

MERCURY (II) IONHG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF14791DNA_pol_B_thumb

DNA polymerase beta thumb

External Links

ECOD PDB View: 2W9M RCSB PDB: 2W9M PDBe: 2W9M UniProt: Q9RX48

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure