ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2yfbB2 - ECOD Domain | ECOD

ECOD/Domains/e2yfbB2

e2yfbB2

UID: 001711733

RepresentativePDB

Range: B:166-277
PDB: 2YFB chain B(all domains)
UniProt: Q88E10 (all domains)
Gene: mcpS

Molecule: METHYL-ACCEPTING CHEMOTAXIS TRANSDUCER

3D Structure

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Related Domains

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Classification

AArchitecturealpha bundles(a.7)

XX-groupFour-helical up-and-down bundle(601)

HH-groupHistidine kinase associated sensor domains(601.4)

TT-groupHistidine kinase associated sensor domains(601.4.1)

FFamilyHBM(601.4.1.5)

Ligands

in contact, ≤ 4 Å

Succinic acidSIN
drugDrugBank DB00139

+ 2 additives (Acetate, Sulfate ion)

AcetateACT
DrugBank DB14511

Pfam Families

Helical bimodular sensor domain

ClanCL04574HB_MCP

External Links

ECOD PDB View: 2YFB RCSB PDB: 2YFB PDBe: 2YFB UniProt: Q88E10

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ion

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.