ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ud8A2 - ECOD Domain | ECOD

ECOD/Domains/e4ud8A2

e4ud8A2

UID: 001711858

PDB

Range: A:255-532
PDB: 4UD8 chain A(all domains)
UniProt: O64743 (all domains)
Gene: MEE23

Molecule: FAD-BINDING AND BBE DOMAIN-CONTAINING PROTEIN

3D Structure

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Related Domains

Browse other domains in BBE →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFAD-linked oxidases, C-terminal domain(304.6)

TT-groupFAD-linked oxidases, C-terminal domain(304.6.1)

FFamilyBBE(304.6.1.3)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
N-AcetylglucosamineNAG
drugDrugBank DB00141

Pfam Families

Berberine and berberine like

ClanCL0277FAD-oxidase_C

External Links

ECOD PDB View: 4UD8 RCSB PDB: 4UD8 PDBe: 4UD8 UniProt: O64743

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

2-(2-{2-[2-(2-{2-[2-(2-Ethoxy-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)-Ethanol, Polyethyleneglycol Peg400

drugDrugBank DB03556

Sodium ionNA

metal

Shown in the structure viewer. Drug annotations from DrugDomain.