ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4xdcA5 - ECOD Domain | ECOD

ECOD/Domains/e4xdcA5

e4xdcA5

UID: 001712157

PDB

Range: A:210-511
PDB: 4XDC chain A(all domains)
UniProt: P29166 (all domains)

Molecule: Iron hydrogenase 1

3D Structure

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Related Domains

Browse other domains in Fe_hyd_lg_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFe-only hydrogenase(7556)

HH-groupFe-only hydrogenase(7556.1)

TT-groupFe-only hydrogenase(7556.1.1)

FFamilyFe_hyd_lg_C(7556.1.1.1)

Ligands

in contact, ≤ 4 Å

dicarbonyl[bis(cyanide-kappaC)]-mu-(iminodimethanethiolatato-1kappaS:2kappaS)-mu-(oxomethylidene)diiron(2+)402
Magnesium ionMG
metal
Iron/sulfur clusterSF4

Shown in the structure viewer.

Pfam Families

PF02906Fe_hyd_lg_C

Iron only hydrogenase large subunit, C-terminal domain

External Links

ECOD PDB View: 4XDC RCSB PDB: 4XDC PDBe: 4XDC UniProt: P29166

Downloads

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Drug annotations from DrugDomain.