ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4zlhB2 - ECOD Domain | ECOD

ECOD/Domains/e4zlhB2

e4zlhB2

UID: 001713370

RepresentativePDB

Range: B:353-389
PDB: 4ZLH chain B(all domains)
UniProt: P0AB60 (all domains)
Gene: lapB

Molecule: Lipopolysaccharide assembly protein B

3D Structure

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Related Domains

Browse other domains in Rubredoxin_2 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyRubredoxin_2(375.1.1.59)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF18073Zn_ribbon_LapB

Rubredoxin metal binding domain

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 4ZLH RCSB PDB: 4ZLH PDBe: 4ZLH UniProt: P0AB60

Downloads

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