ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ud0B1 - ECOD Domain | ECOD

ECOD/Domains/e4ud0B1

e4ud0B1

UID: 001713477

PDB

Range: B:1616-1885
PDB: 4UD0 chain B(all domains)
UniProt: Q91L20 (all domains)
Gene: L

Molecule: RNA-DIRECTED RNA POLYMERASE L

3D Structure

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Related Domains

Browse other domains in Methyltrans_Mon_2nd →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltrans_Mon_2nd(2003.1.5.83)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752
Zinc ionZN
metal

+ 1 additive (Sulfate ion)

Pfam Families

PF14314Methyltrans_Mon_2nd

Virus-capping methyltransferase, MT domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4UD0 RCSB PDB: 4UD0 PDBe: 4UD0 UniProt: Q91L20

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.