ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4x66E2 - ECOD Domain | ECOD

ECOD/Domains/e4x66E2

e4x66E2

UID: 001713592

PDB

Range: E:74-155
PDB: 4X66 chain E(all domains)
UniProt: Q5SHQ5 (all domains)
Gene: rpsE

Molecule: 30S ribosomal protein S5

3D Structure

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Related Domains

Browse other domains in Ribosomal_S5_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein S5 domain 2-like(212)

HH-groupRibosomal protein S5 domain 2-like(212.1)

TT-groupRibosomal protein S5 domain 2-like(212.1.1)

FFamilyRibosomal_S5_C(212.1.1.16)

Ligands

in contact, ≤ 4 Å

ParomomycinPAR
Potassium ionK
metalwithin 5 Å only
Magnesium ionMG
metal

Pfam Families

PF03719Ribosomal_S5_C

Ribosomal protein S5, C-terminal domain

ClanCL0329S5

External Links

ECOD PDB View: 4X66 RCSB PDB: 4X66 PDBe: 4X66 UniProt: Q5SHQ5

Downloads

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within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.