ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5bnnA1 - ECOD Domain | ECOD

ECOD/Domains/e5bnnA1

e5bnnA1

UID: 001713715

PDB

Range: A:1-295
PDB: 5BNN chain A(all domains)
UniProt: Q68T42 (all domains)

Molecule: Capsid protein VP1

3D Structure

Loading viewer...

Related Domains

Browse other domains in Rhv_5 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyRhv_5(10.2.1.69)

Pfam Families

Picornavirus coat protein

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 5BNN RCSB PDB: 5BNN PDBe: 5BNN UniProt: Q68T42

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure