ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5bynB1 - ECOD Domain | ECOD

ECOD/Domains/e5bynB1

e5bynB1

UID: 001713775

PDB

Range: B:1-237
PDB: 5BYN chain B(all domains)
UniProt: P81460 (all domains)

Molecule: Concanavalin-A

3D Structure

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Related Domains

Browse other domains in Lectin_legB →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilyLectin_legB(10.1.1.2)

Ligands

in contact, ≤ 4 Å

(4R)-4-{[(S)-tert-butoxy(hydroxy)methyl]amino}-5-[(1S)-cyclohex-2-en-1-ylselanyl]pentane-1,1-diol4WM
Calcium ionCA
metal
MANGANESE (II) IONMN

Pfam Families

PF00139Lectin_legB

Legume lectin domain

ClanCL0004Concanavalin

External Links

ECOD PDB View: 5BYN RCSB PDB: 5BYN PDBe: 5BYN UniProt: P81460

Downloads

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metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.