ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ruhA2 - ECOD Domain | ECOD

ECOD/Domains/e4ruhA2

e4ruhA2

UID: 001714507

PDB

Range: A:211-384
PDB: 4RUH chain A(all domains)
UniProt: Q96KP4 (all domains)
Gene: CNDP2

Molecule: Cytosolic non-specific dipeptidase

3D Structure

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Related Domains

Browse other domains in M20_dimer →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupBacterial exopeptidase dimerisation domain(304.25)

TT-groupBacterial exopeptidase dimerisation domain(304.25.1)

FFamilyM20_dimer(304.25.1.1)

Ligands

in contact, ≤ 4 Å

UbenimexBES
drugDrugBank DB03424
MANGANESE (II) IONMN
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from .

Pfam Families

PF07687M20_dimer

Peptidase dimerisation domain

External Links

ECOD PDB View: 4RUH RCSB PDB: 4RUH PDBe: 4RUH UniProt: Q96KP4

Downloads

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