ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4x9qA1 - ECOD Domain | ECOD

ECOD/Domains/e4x9qA1

e4x9qA1

UID: 001714639

PDB

Range: A:1-85
PDB: 4X9Q chain A(all domains)
UniProt: P41977 (all domains)
Gene: sod-3

Molecule: Superoxide dismutase [Mn] 2, mitochondrial

3D Structure

Loading viewer...

Related Domains

Browse other domains in Sod_Fe_N →

Classification

AArchitecturealpha bundles(a.7)

XX-groupLong alpha-hairpin(192)

HH-groupFe,Mn superoxide dismutase (SOD), N-terminal domain(192.3)

TT-groupFe,Mn superoxide dismutase (SOD), N-terminal domain(192.3.1)

FFamilySod_Fe_N(192.3.1.1)

Ligands

in contact, ≤ 4 Å

MANGANESE (II) IONMN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00081Sod_Fe_N

Iron/manganese superoxide dismutases, alpha-hairpin domain

External Links

ECOD PDB View: 4X9Q RCSB PDB: 4X9Q PDBe: 4X9Q UniProt: P41977

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure