ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5d6xA2 - ECOD Domain | ECOD

ECOD/Domains/e5d6xA2

e5d6xA2

UID: 001714917

PDB

Range: A:897-955
PDB: 5D6X chain A(all domains)
UniProt: O75164 (all domains)
Gene: KDM4A

Molecule: Lysine-specific demethylase 4A

3D Structure

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Related Domains

Browse other domains in Tudor_2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyTudor_2(4.1.1.101)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF18104Tudor_2

Jumonji domain-containing protein 2A Tudor domain

ClanCL0010SH3

External Links

ECOD PDB View: 5D6X RCSB PDB: 5D6X PDBe: 5D6X UniProt: O75164

Downloads

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