ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5dtoA2 - ECOD Domain | ECOD

ECOD/Domains/e5dtoA2

e5dtoA2

UID: 001714974

PDB

Range: A:263-700
PDB: 5DTO chain A(all domains)
UniProt: Q6DLV0 (all domains)

Molecule: NS5

3D Structure

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Related Domains

Browse other domains in Flavi_NS5 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyFlavi_NS5(304.48.1.13)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
Zinc ionZN
metal

+ 1 additive (Acetate)

AcetateACT

Pfam Families

PF00972Flavi_NS5

Flavivirus RNA-directed RNA polymerase, fingers and palm domains

ClanCL0027RdRP

External Links

ECOD PDB View: 5DTO RCSB PDB: 5DTO PDBe: 5DTO UniProt: Q6DLV0

Downloads

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DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.