ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5dx0C1 - ECOD Domain | ECOD

ECOD/Domains/e5dx0C1

e5dx0C1

UID: 001714989

PDB

Range: C:135-288
PDB: 5DX0 chain C(all domains)
UniProt: Q86X55 (all domains)
Gene: CARM1

Molecule: Histone-arginine methyltransferase CARM1

3D Structure

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Related Domains

Browse other domains in PrmA →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyPrmA(2003.1.5.55)

Ligands

in contact, ≤ 4 Å

SinefunginSFG
drugDrugBank DB01910

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

Ribosomal protein L11 methyltransferase (PrmA)

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5DX0 RCSB PDB: 5DX0 PDBe: 5DX0 UniProt: Q86X55

Downloads

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Drug annotations from DrugDomain.