ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5fj8B7 - ECOD Domain | ECOD

ECOD/Domains/e5fj8B7

e5fj8B7

UID: 001715085

PDB

Range: B:517-605
PDB: 5FJ8 chain B(all domains)
UniProt: P22276 (all domains)
Gene: RET1

Molecule: DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC2

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNA_pol_Rpb2_4 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupinserted a+b domain in yeast RNA polymerase beta subunit(4961)

HH-groupinserted a+b domain in yeast RNA polymerase beta subunit(4961.1)

TT-groupinserted a+b domain in yeast RNA polymerase beta subunit(4961.1.1)

FFamilyRNA_pol_Rpb2_4(4961.1.1.1)

Pfam Families

PF04566RNA_pol_Rpb2_4

RNA polymerase Rpb2, domain 4

External Links

ECOD PDB View: 5FJ8 RCSB PDB: 5FJ8 PDBe: 5FJ8 UniProt: P22276

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure