ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5fmfJ1 - ECOD Domain | ECOD

ECOD/Domains/e5fmfJ1

e5fmfJ1

UID: 001715218

PDB

Range: J:1-65
PDB: 5FMF chain J(all domains)
UniProt: P22139 (all domains)
Gene: RPB10

Molecule: DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5, RPB10

3D Structure

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Related Domains

Browse other domains in RNA_pol_N →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupRPB10(101.4)

TT-groupRPB10(101.4.1)

FFamilyRNA_pol_N(101.4.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01194RNA_pol_N

RNA polymerases N / 8 kDa subunit

External Links

ECOD PDB View: 5FMF RCSB PDB: 5FMF PDBe: 5FMF UniProt: P22139

Downloads

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