ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2yfbA1 - ECOD Domain | ECOD

ECOD/Domains/e2yfbA1

e2yfbA1

UID: 001715606

PDB

Range: A:46-165
PDB: 2YFB chain A(all domains)
UniProt: Q88E10 (all domains)
Gene: mcpS

Molecule: METHYL-ACCEPTING CHEMOTAXIS TRANSDUCER

3D Structure

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Related Domains

Browse other domains in HBM →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFour-helical up-and-down bundle(601)

HH-groupCytochromes(601.2)

TT-groupCytochromes(601.2.1)

FFamilyHBM(601.2.1.7)

Ligands

in contact, ≤ 4 Å

Succinic acidSIN
drugDrugBank DB00139

+ 2 additives (Acetate, Sulfate ion)

AcetateACT
DrugBank DB14511

Pfam Families

Helical bimodular sensor domain

ClanCL04574HB_MCP

External Links

ECOD PDB View: 2YFB RCSB PDB: 2YFB PDBe: 2YFB UniProt: Q88E10

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ion

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.