ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5d88A1 - ECOD Domain | ECOD

ECOD/Domains/e5d88A1

e5d88A1

UID: 001715987

RepresentativePDB

Range: A:1-234
PDB: 5D88 chain A(all domains)
UniProt: Q8TWX5 (all domains)
Gene: MK0906

Molecule: Predicted protease of the collagenase family

3D Structure

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Related Domains

Browse other domains in this classification →

Classification

AArchitecture—

XX-group—

HH-group—

TT-group—

FFamily—

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.

External Links

ECOD PDB View: 5D88 RCSB PDB: 5D88 PDBe: 5D88 UniProt: Q8TWX5

Downloads

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