ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ndiA1 - ECOD Domain | ECOD

ECOD/Domains/e3ndiA1

e3ndiA1

UID: 001716673

RepresentativePDB

Range: A:10-66
PDB: 3NDI chain A(all domains)
UniProt: B5L6K6 (all domains)

Molecule: Methyltransferase

3D Structure

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Related Domains

Browse other domains in Methyltransf_13 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyMethyltransf_13(375.1.1.41)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523within 5 Å only

Shown in the structure viewer. Drug annotations from .

Pfam Families

PF08421Methyltransf_13

Putative zinc binding domain

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 3NDI RCSB PDB: 3NDI PDBe: 3NDI UniProt: B5L6K6

Downloads

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