ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ndiA3 - ECOD Domain | ECOD

ECOD/Domains/e3ndiA3

e3ndiA3

UID: 001716675

RepresentativePDB

Range: A:288-414
PDB: 3NDI chain A(all domains)
UniProt: B5L6K6 (all domains)

Molecule: Methyltransferase

3D Structure

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Related Domains

Browse other domains in Methyltransf_14 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyMethyltransf_14(2003.1.1.60)

Ligands

in contact, ≤ 4 Å

Thymidine monophosphateTMP
drugDrugBank DB01643

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08484Methyltransf_14

C-methyltransferase C-terminal domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3NDI RCSB PDB: 3NDI PDBe: 3NDI UniProt: B5L6K6

Downloads

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