ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4tvbA1 - ECOD Domain | ECOD

ECOD/Domains/e4tvbA1

e4tvbA1

UID: 001716685

RepresentativePDB

Range: A:3-160,A:391-477
PDB: 4TVB chain A(all domains)
UniProt: O32323 (all domains)
Gene: hss

Molecule: Homospermidine synthase

3D Structure

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Related Domains

Browse other domains in Sacchrp_dh_NADP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilySacchrp_dh_NADP(2003.1.1.39)

Ligands

in contact, ≤ 4 Å

NADHNAI
drugDrugBank DB00157
3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE1PS
sym-homospermidine37Z

Pfam Families

PF03435Sacchrp_dh_NADP

Saccharopine dehydrogenase NADP binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4TVB RCSB PDB: 4TVB PDBe: 4TVB UniProt: O32323

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.