ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5a88D1 - ECOD Domain | ECOD

ECOD/Domains/e5a88D1

e5a88D1

UID: 001716895

PDB

Range: D:186-336
PDB: 5A88 chain D(all domains)
UniProt: Q59263 (all domains)
Gene: ribF

Molecule: RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBF

3D Structure

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Related Domains

Browse other domains in Flavokinase →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupAlanine racemase-C(1.1.7)

FFamilyFlavokinase(1.1.7.10)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Calcium ionCA
metal

+ 1 additive (Glycerin)

Pfam Families

PF01687Flavokinase

Riboflavin kinase

ClanCL0866ALR_C-like

External Links

ECOD PDB View: 5A88 RCSB PDB: 5A88 PDBe: 5A88 UniProt: Q59263

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.