ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5dgrA2 - ECOD Domain | ECOD

ECOD/Domains/e5dgrA2

e5dgrA2

UID: 001717025

PDB

Range: A:91-578
PDB: 5DGR chain A(all domains)
UniProt: Q6LUT2 (all domains)
Gene: VV2739

Molecule: Putative endoglucanase-related protein

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_9 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyGlyco_hydro_9(109.2.1.3)

Ligands

in contact, ≤ 4 Å

2-amino-2-deoxy-beta-D-glucopyranoseGCS
Sodium ionNA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00759Glyco_hydro_9

Glycosyl hydrolase family 9

ClanCL00596_Hairpin

External Links

ECOD PDB View: 5DGR RCSB PDB: 5DGR PDBe: 5DGR UniProt: Q6LUT2

Downloads

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