ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5douC3 - ECOD Domain | ECOD

ECOD/Domains/e5douC3

e5douC3

UID: 001717064

PDB

Range: C:1089-1353
PDB: 5DOU chain C(all domains)
UniProt: P31327 (all domains)
Gene: CPS1

Molecule: Carbamoyl-phosphate synthase [ammonia], mitochondrial

3D Structure

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Related Domains

Browse other domains in CPSase_L_D2 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupATP-grasp(206.1.3)

FFamilyCPSase_L_D2(206.1.3.10)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Potassium ionK
metal
Magnesium ion

Pfam Families

PF02786CPSase_L_D2

Carbamoyl-phosphate synthase L chain, ATP binding domain

ClanCL0179ATP-grasp

External Links

ECOD PDB View: 5DOU RCSB PDB: 5DOU PDBe: 5DOU UniProt: P31327

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.