ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3dd1B2 - ECOD Domain | ECOD

ECOD/Domains/e3dd1B2

e3dd1B2

UID: 001717366

PDB

Range: B:23-484
PDB: 3DD1 chain B(all domains)
UniProt: P06737 (all domains)
Gene: PYGL

Molecule: Glycogen phosphorylase, liver form

3D Structure

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Related Domains

Browse other domains in Phosphorylase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512)

HH-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1)

TT-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1.1)

FFamilyPhosphorylase(7512.1.1.2)

Ligands

in contact, ≤ 4 Å

CaffeineCFF
drugDrugBank DB00201
N-beta-D-glucopyranosylacetamideNBG
drugDrugBank DB02320

Pfam Families

PF00343Phosphorylase

Carbohydrate phosphorylase

ClanCL0113GT-B

External Links

ECOD PDB View: 3DD1 RCSB PDB: 3DD1 PDBe: 3DD1 UniProt: P06737

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Pyridoxal phosphate

drugDrugBank DB00114

2-cyclohexyl-N-[(3-{[(2,4,6-trimethylphenyl)carbamoyl]amino}naphthalen-2-yl)carbonyl]-D-alanine25D

+ 2 additives (2-(N-morpholino)ethanesulfonic acid, (4r)-2-Methylpentane-2,4-Diol)

2-(N-morpholino)ethanesulfonic acidMES
DrugBank DB03814
(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.