ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1em6B1 - ECOD Domain | ECOD

ECOD/Domains/e1em6B1

e1em6B1

UID: 001717465

PDB

Range: B:22-484
PDB: 1EM6 chain B(all domains)
UniProt: P06737 (all domains)
Gene: PYGL

Molecule: LIVER GLYCOGEN PHOSPHORYLASE

3D Structure

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Related Domains

Browse other domains in Phosphorylase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512)

HH-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1)

TT-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1.1)

FFamilyPhosphorylase(7512.1.1.2)

Ligands

in contact, ≤ 4 Å

CP-526423CP4
drugDrugBank DB02089
N-beta-D-glucopyranosylacetamideNBG
drugDrugBank DB02320

Pfam Families

PF00343Phosphorylase

Carbohydrate phosphorylase

ClanCL0113GT-B

External Links

ECOD PDB View: 1EM6 RCSB PDB: 1EM6 PDBe: 1EM6 UniProt: P06737

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Pyridoxal phosphatePLP

drugDrugBank DB00114

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.