ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1m5rB2 - ECOD Domain | ECOD

ECOD/Domains/e1m5rB2

e1m5rB2

UID: 001717871

PDB

Range: B:1-170
PDB: 1M5R chain B(all domains)
UniProt: P04547 (all domains)
Gene: bgt

Molecule: DNA beta-glucosyltransferase

3D Structure

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Related Domains

Browse other domains in T4-Gluco-transf →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512)

HH-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1)

TT-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1.1)

FFamilyT4-Gluco-transf(7512.1.1.25)

Ligands

in contact, ≤ 4 Å

Uridine-5'-DiphosphateUDP
drugDrugBank DB03435

+ 2 additives ((4r)-2-Methylpentane-2,4-Diol, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Pfam Families

PF09198T4-Gluco-transf

Bacteriophage T4 beta-glucosyltransferase

ClanCL0113GT-B

External Links

ECOD PDB View: 1M5R RCSB PDB: 1M5R PDBe: 1M5R UniProt: P04547

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOLTRS

Shown in the structure viewer. Drug annotations from DrugDomain.