ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1nlmB1 - ECOD Domain | ECOD

ECOD/Domains/e1nlmB1

e1nlmB1

UID: 001717958

PDB

Range: B:7-162
PDB: 1NLM chain B(all domains)
UniProt: P17443 (all domains)
Gene: murG

Molecule: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase

3D Structure

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Related Domains

Browse other domains in Glyco_transf_28 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512)

HH-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1)

TT-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1.1)

FFamilyGlyco_transf_28(7512.1.1.10)

Ligands

in contact, ≤ 4 Å

Uridine-Diphosphate-N-AcetylglucosamineUD1
drugDrugBank DB03397

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Pfam Families

PF03033Glyco_transf_28

Glycosyltransferase family 28 N-terminal domain

ClanCL0113GT-B

External Links

ECOD PDB View: 1NLM RCSB PDB: 1NLM PDBe: 1NLM UniProt: P17443

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.