ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1rrvA1 - ECOD Domain | ECOD

ECOD/Domains/e1rrvA1

e1rrvA1

UID: 001718325

PDB

Range: A:221-401
PDB: 1RRV chain A(all domains)
UniProt: Q9AFC7 (all domains)
Gene: gtfD

Molecule: GLYCOSYLTRANSFERASE GTFD

3D Structure

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Related Domains

Browse other domains in EryCIII-like_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512)

HH-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1)

TT-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1.1)

FFamilyEryCIII-like_C(7512.1.1.20)

Ligands

in contact, ≤ 4 Å

Thymidine-5'- DiphosphateTYD
drugDrugBank DB03103
Potassium ionK
metal

+ 1 additive (Glycerin)

Pfam Families

PF06722EryCIII-like_C

Erythromycin biosynthesis protein CIII-like, C-terminal domain

ClanCL0113GT-B

External Links

ECOD PDB View: 1RRV RCSB PDB: 1RRV PDBe: 1RRV UniProt: Q9AFC7

Downloads

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GlycerinGOL

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.