ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4xgvD1 - ECOD Domain | ECOD

ECOD/Domains/e4xgvD1

e4xgvD1

UID: 001718909

PDB

Range: D:206-329
PDB: 4XGV chain D(all domains)
UniProt: P0AB85 (all domains)
Gene: apbE

Molecule: FAD:protein FMN transferase

3D Structure

Loading viewer...

Related Domains

Browse other domains in ApbE →

Classification

AArchitecturea+b two layers(a.11)

XX-groupT-fold(230)

HH-groupApbE-like(230.4)

TT-groupApbE-like(230.4.1)

FFamilyApbE(230.4.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

ApbE family

ClanCL0989ApbE

External Links

ECOD PDB View: 4XGV RCSB PDB: 4XGV PDBe: 4XGV UniProt: P0AB85

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure