ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4xgvA1 - ECOD Domain | ECOD

ECOD/Domains/e4xgvA1

e4xgvA1

UID: 001720161

RepresentativePDB

Range: A:12-204
PDB: 4XGV chain A(all domains)
UniProt: P0AB85 (all domains)
Gene: apbE

Molecule: FAD:protein FMN transferase

3D Structure

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Related Domains

Browse other domains in ApbE →

Classification

AArchitecturea+b two layers(a.11)

XX-groupT-fold(230)

HH-groupApbE-like(230.4)

TT-groupApbE-like(230.4.1)

FFamilyApbE(230.4.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Sodium ionNA
metal

+ 2 additives (Acetate, 1,2-ETHANEDIOL)

AcetateACT

Pfam Families

ApbE family

ClanCL0989ApbE

External Links

ECOD PDB View: 4XGV RCSB PDB: 4XGV PDBe: 4XGV UniProt: P0AB85

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14511

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.