ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4x6zM1 - ECOD Domain | ECOD

ECOD/Domains/e4x6zM1

e4x6zM1

UID: 001720344

PDB

Range: M:-8-213
PDB: 4X6Z chain M(all domains)
UniProt: P23724 (all domains)
Gene: PRE7

Molecule: Proteasome subunit beta type-6

3D Structure

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Related Domains

Browse other domains in Proteasome →

Classification

AArchitecturea+b four layers(a.13)

XX-groupNtn/PP2C(210)

HH-groupNtn(210.1)

TT-groupProteasome subunits(210.1.1)

FFamilyProteasome(210.1.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 2 additives (Glycerin, (4r)-2-Methylpentane-2,4-Diol)

GlycerinGOL
DrugBank DB09462
(4r)-2-Methylpentane-2,4-Diol

Pfam Families

PF00227Proteasome

Proteasome subunit

ClanCL0052NTN

External Links

ECOD PDB View: 4X6Z RCSB PDB: 4X6Z PDBe: 4X6Z UniProt: P23724

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.