ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5f4cB1 - ECOD Domain | ECOD

ECOD/Domains/e5f4cB1

e5f4cB1

UID: 001720749

PDB

Range: B:0-90
PDB: 5F4C chain B(all domains)
UniProt: Q7CPM9 (all domains)
Gene: yhcO

Molecule: Putative cytoplasmic protein

3D Structure

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Related Domains

Browse other domains in Barstar →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupBarstar (barnase inhibitor)(2489)

HH-groupBarstar (barnase inhibitor)(2489.1)

TT-groupBarstar (barnase inhibitor)(2489.1.1)

FFamilyBarstar(2489.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Malonate Ion)

Malonate IonMLI
DrugBank DB02201

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01337Barstar

Barstar (barnase inhibitor)

External Links

ECOD PDB View: 5F4C RCSB PDB: 5F4C PDBe: 5F4C UniProt: Q7CPM9

Downloads

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