ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5fd8B2 - ECOD Domain | ECOD

ECOD/Domains/e5fd8B2

e5fd8B2

UID: 001721925

PDB

Range: B:-1-155
PDB: 5FD8 chain B(all domains)
UniProt: Q81JT5 (all domains)

Molecule: LD-carboxypeptidase family protein

3D Structure

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Related Domains

Browse other domains in Peptidase_S66 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupClass I glutamine amidotransferase-like(2007.1.1)

FFamilyPeptidase_S66(2007.1.1.4)

Ligands

in contact, ≤ 4 Å

5'-O-(N-(Alanyl)sulfamoyl)adenosineA5A
drugDrugBank DB03376

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02016Peptidase_S66

LD-carboxypeptidase N-terminal domain

ClanCL0014Glutaminase_I

External Links

ECOD PDB View: 5FD8 RCSB PDB: 5FD8 PDBe: 5FD8 UniProt: Q81JT5

Downloads

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