ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5fisB1 - ECOD Domain | ECOD

ECOD/Domains/e5fisB1

e5fisB1

UID: 001722640

PDB

Range: B:75-315
PDB: 5FIS chain B(all domains)
UniProt: H9IUR0 (all domains)
Gene: EXD1

Molecule: EXD1

3D Structure

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Related Domains

Browse other domains in DNA_pol_A_exo1 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyDNA_pol_A_exo1(2484.1.1.20)

Ligands

in contact, ≤ 4 Å

Gadolinium atomGD
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01612DNA_pol_A_exo1

3'-5' exonuclease

ClanCL0219RNase_H

External Links

ECOD PDB View: 5FIS RCSB PDB: 5FIS PDBe: 5FIS UniProt: H9IUR0

Downloads

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