ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ekeC1 - ECOD Domain | ECOD

ECOD/Domains/e5ekeC1

e5ekeC1

UID: 001723271

RepresentativePDB

Range: C:1-314
PDB: 5EKE chain C(all domains)
UniProt: Q55487 (all domains)
Gene: sll0501

Molecule: Uncharacterized glycosyltransferase sll0501

3D Structure

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Related Domains

Browse other domains in Glycos_transf_2, GtrB_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNucleotide-diphospho-sugar transferases(7516)

HH-groupNucleotide-diphospho-sugar transferases(7516.1)

TT-groupNucleotide-diphospho-sugar transferases(7516.1.1)

FFamilyGlycos_transf_2, GtrB_C(7516.1.1.106)

Ligands

in contact, ≤ 4 Å

Uridine-5'-DiphosphateUDP
drugDrugBank DB03435
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00535Glycos_transf_2

Glycosyl transferase family 2

ClanCL0110GT-A

GtrB C-terminal hairpin

External Links

ECOD PDB View: 5EKE RCSB PDB: 5EKE PDBe: 5EKE UniProt: Q55487

Downloads

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