ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5df7B1 - ECOD Domain | ECOD

ECOD/Domains/e5df7B1

e5df7B1

UID: 001723876

PDB

Range: B:57-78,B:151-222
PDB: 5DF7 chain B(all domains)
UniProt: Q51504 (all domains)
Gene: pbpB

Molecule: Cell division protein

3D Structure

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Related Domains

Browse other domains in PBP_dimer →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupPenicillin binding protein dimerisation domain(3702)

HH-groupPenicillin binding protein dimerisation domain(3702.1)

TT-groupPenicillin binding protein dimerisation domain(3702.1.1)

FFamilyPBP_dimer(3702.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 1 additive (Imidazole)

ImidazoleIMD
DrugBank DB03366

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03717PBP_dimer

Penicillin-binding Protein dimerisation domain

ClanCL0776PBP_NTD

External Links

ECOD PDB View: 5DF7 RCSB PDB: 5DF7 PDBe: 5DF7 UniProt: Q51504

Downloads

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