ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5djqB1 - ECOD Domain | ECOD

ECOD/Domains/e5djqB1

e5djqB1

UID: 001723898

PDB

Range: B:6-202
PDB: 5DJQ chain B(all domains)
UniProt: D9IA44 (all domains)
Gene: ccoO1

Molecule: Cbb3-type cytochrome c oxidase subunit II

3D Structure

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Related Domains

Browse other domains in FixO →

Classification

AArchitecturealpha arrays(a.6)

XX-groupCytochrome c-like(107)

HH-groupCytochrome c(107.1)

TT-groupCytochrome c(107.1.1)

FFamilyFixO(107.1.1.3)

Ligands

in contact, ≤ 4 Å

Ferroheme CHEC
drugDrugBank DB03317
FerrohemeHEM
drugDrugBank DB18267
Calcium ion

Pfam Families

Cytochrome C oxidase, mono-heme subunit/FixO

ClanCL0318Cytochrome-c

External Links

ECOD PDB View: 5DJQ RCSB PDB: 5DJQ PDBe: 5DJQ UniProt: D9IA44

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.