ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5ekpB1 - ECOD Domain | ECOD

ECOD/Domains/e5ekpB1

e5ekpB1

UID: 001725200

PDB

Range: B:2-316
PDB: 5EKP chain B(all domains)
UniProt: Q55487 (all domains)
Gene: sll0501

Molecule: Uncharacterized glycosyltransferase sll0501

3D Structure

Loading viewer...

Related Domains

Browse other domains in Glycos_transf_2, GtrB_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNucleotide-diphospho-sugar transferases(7516)

HH-groupNucleotide-diphospho-sugar transferases(7516.1)

TT-groupNucleotide-diphospho-sugar transferases(7516.1.1)

FFamilyGlycos_transf_2, GtrB_C(7516.1.1.106)

Ligands

in contact, ≤ 4 Å

Uridine-5'-DiphosphateUDP
drugDrugBank DB03435
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00535Glycos_transf_2

Glycosyl transferase family 2

ClanCL0110GT-A

GtrB C-terminal hairpin

External Links

ECOD PDB View: 5EKP RCSB PDB: 5EKP PDBe: 5EKP UniProt: Q55487

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure